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‘Inverse vaccines’: the promise of a ‘holy grail’ treatment for autoimmune diseases

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Autoimmune diseases affect nearly 800 million people worldwide—about one in every ten of us. Conditions such as multiple sclerosislupustype one diabetes, and rheumatoid arthritis all stem from a common cause: the body’s immune system mistakenly attacking its own cells.

Current treatments suppress the immune response across the board, leaving patients vulnerable to infections and often requiring daily, invasive care. But now, a scientific revolution is brewing, offering new hope.

Enter Inverse Vaccines: A Targeted Solution

Researchers are developing inverse vaccines, a game-changing approach that selectively suppresses only the rogue part of the immune system while leaving the rest intact. Instead of ramping up the immune response like traditional vaccines, inverse vaccines calm it down—precisely and effectively.

“This is the holy grail,” says Stephen Miller, an immunologist at Northwestern University. “We want to use a scalpel rather than a sledgehammer to treat these diseases.”

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Promising Results in Celiac Disease and Multiple Sclerosis

In 2022, Miller’s team published groundbreaking research showing that an inverse vaccine could protect celiac diseasepatients from gluten-triggered intestinal damage. In the trial, patients who received the vaccine experienced no harm when exposed to gluten, while those on a placebo saw their symptoms worsen.

Similarly, in 2023, Jeffrey Hubbell and his colleagues at NYU showed that their method could halt multiple sclerosis (MS) in mice. Early human trials led by their biotech startup Anokion have already reported success in both celiac disease and MS. “There have been more than a few tears of happiness,” says Hubbell.

How Inverse Vaccines Work: Re-Educating the Immune System

The science behind inverse vaccines is as elegant as it is effective. The treatment uses synthetic nanoparticles attached to disease-related proteins, known as antigens. These particles mimic dying human cells—a natural part of life that the immune system learns to ignore.

“What this does is, it re-educates the immune system,” explains Hubbell. “So then it says: ‘OK, I’m good, I don’t need to attack this, because I see that it’s not a threat.’”

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Expanding the Potential: From Type 1 Diabetes to Rare Liver Diseases

Pere Santamaria at the University of Calgary, a pioneer in this field, has extended the approach to type 1 diabetes and rare diseases like primary biliary cholangitis (PBC). His startup, Parvus Therapeutics, is already in collaboration with pharma giant AbbVie to push these treatments toward market approval.

“Once we get approval for one indication, we may be able to go faster with others,” Santamaria says, highlighting the broad versatility of inverse vaccines.

Early Success in Allergies and Asthma

Beyond autoimmune diseases, inverse vaccines are showing promise in treating allergies. Studies have demonstrated success in mice allergic to peanuts, dust mites, and even meat (in the case of alpha-gal syndrome).

University of Michigan’s Lonnie Shea reports that vaccinated mice were able to tolerate allergens without severe symptoms. “We were able to basically convince the immune system that these proteins are not dangerous,” Shea says.

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When Will Inverse Vaccines Be Available?

Several inverse vaccines are now in Phase 2 clinical trials. Industry insiders estimate that the first treatments could be available to patients in three to five years, though others suggest a timeline closer to ten years.

In December, Genentech announced a partnership worth up to $900 million with Cour Pharmaceuticals, the company founded by Miller and Shea, signaling growing confidence in this technology.

A Future Filled With Hope

Despite the challenges ahead, the scientific community is optimistic. “Twenty years ago, I would have told you this wasn’t possible,” says Miller. “Today, I can say that it will happen. No doubt.”

If successful, inverse vaccines could replace daily immune-suppressing drugs with a safer, longer-lasting alternative—giving millions of patients around the world a new lease on life.

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